Simbody  3.4 (development)
GCVSPLUtil.h
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00001 #ifndef SimTK_SIMMATH_GCVSPL_UTIL_H_
00002 #define SimTK_SIMMATH_GCVSPL_UTIL_H_
00003 
00004 /* -------------------------------------------------------------------------- *
00005  *                        Simbody(tm): SimTKmath                              *
00006  * -------------------------------------------------------------------------- *
00007  * This is part of the SimTK biosimulation toolkit originating from           *
00008  * Simbios, the NIH National Center for Physics-Based Simulation of           *
00009  * Biological Structures at Stanford, funded under the NIH Roadmap for        *
00010  * Medical Research, grant U54 GM072970. See https://simtk.org/home/simbody.  *
00011  *                                                                            *
00012  * Portions copyright (c) 2008-12 Stanford University and the Authors.        *
00013  * Authors: Peter Eastman                                                     *
00014  * Contributors:                                                              *
00015  *                                                                            *
00016  * Licensed under the Apache License, Version 2.0 (the "License"); you may    *
00017  * not use this file except in compliance with the License. You may obtain a  *
00018  * copy of the License at http://www.apache.org/licenses/LICENSE-2.0.         *
00019  *                                                                            *
00020  * Unless required by applicable law or agreed to in writing, software        *
00021  * distributed under the License is distributed on an "AS IS" BASIS,          *
00022  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.   *
00023  * See the License for the specific language governing permissions and        *
00024  * limitations under the License.                                             *
00025  * -------------------------------------------------------------------------- */
00026 
00027 #include "SimTKcommon.h"
00028 #include "simmath/internal/common.h"
00029 
00030 // These are global functions.
00031 int SimTK_gcvspl_(const SimTK::Real *, const SimTK::Real *, int *, const SimTK::Real *, const SimTK::Real *, int *, int *,
00032                   int *, int *, SimTK::Real *, SimTK::Real *, int *, SimTK::Real *, int *);
00033 SimTK::Real SimTK_splder_(int *, int *, int *, SimTK::Real *, const SimTK::Real *, const SimTK::Real *, int *, SimTK::Real *, int);
00034 
00035 namespace SimTK {
00036 
00044 class SimTK_SIMMATH_EXPORT GCVSPLUtil {
00045 public:
00046     static void gcvspl(const Vector& x, const Vector& y, const Vector& wx, Real wy, int m, int md, Real val, Vector& c, Vector& wk, int& ier);
00047     template <int K>
00048     static void gcvspl(const Vector& x, const Vector_<Vec<K> >& y, const Vector& wx, Vec<K> wy, int m, int md, Real val, Vector_<Vec<K> >& c, Vector& wk, int& ier);
00049     static Real splder(int derivOrder, int degree, Real t, const Vector& x, const Vector& coeff);
00050     template <int K>
00051     static Vec<K> splder(int derivOrder, int degree, Real t, const Vector& x, const Vector_<Vec<K> >& coeff);
00052 };
00053 
00054 template <int K>
00055 void GCVSPLUtil::gcvspl(const Vector& x, const Vector_<Vec<K> >& y, const Vector& wx, Vec<K> wy, int degree, int md, Real val, Vector_<Vec<K> >& c, Vector& wk, int& ier) {
00056     SimTK_APIARGCHECK_ALWAYS(degree > 0 && degree%2==1, "GCVSPLUtil", "gcvspl", "degree must be positive and odd");
00057     SimTK_APIARGCHECK_ALWAYS(y.size() >= x.size(), "GCVSPLUtil", "gcvspl", "y is shorter than x");
00058     SimTK_APIARGCHECK_ALWAYS(wx.size() >= x.size(), "GCVSPLUtil", "gcvspl", "wx and x must be the same size");
00059     SimTK_APIARGCHECK_ALWAYS(x.hasContiguousData(), "GCVSPLUtil", "gcvspl", "x must have contiguous storage (i.e. not be a view)");
00060     SimTK_APIARGCHECK_ALWAYS(wk.hasContiguousData(), "GCVSPLUtil", "gcvspl", "wk must have contiguous storage (i.e. not be a view)");
00061     
00062     // Create various temporary variables.
00063     
00064     int m = (degree+1)/2;
00065     int n = x.size();
00066     int ny = y.size();
00067     Vector yvec(ny*K);
00068     int index = 0;
00069     for (int j = 0; j < K; ++j)
00070         for (int i = 0; i < ny; ++i)
00071             yvec[index++] = y[i][j];
00072     int nc = n*K;
00073     Vector cvec(nc);
00074     wk.resize(6*(m*n+1)+n);
00075     int k = K;
00076     
00077     // Invoke GCV.
00078     
00079     SimTK_gcvspl_(&x[0], &yvec[0], &ny, &wx[0], &wy[0], &m, &n, &k, &md, &val, &cvec[0], &n, &wk[0], &ier);
00080     if (ier != 0) {
00081         SimTK_APIARGCHECK_ALWAYS(n >= 2*m, "GCVSPLUtil", "gcvspl", "Too few data points");
00082         SimTK_APIARGCHECK_ALWAYS(ier != 2, "GCVSPLUtil", "gcvspl", "The values in x must be strictly increasing");
00083         SimTK_APIARGCHECK_ALWAYS(ier == 0, "GCVSPLUtil", "gcvspl", "GCVSPL returned an error code");
00084     }
00085     c.resize(n);
00086     index = 0;
00087     for (int j = 0; j < K; ++j)
00088         for (int i = 0; i < n; ++i)
00089             c[i][j] = cvec[index++];
00090 }
00091 
00092 template <int K>
00093 Vec<K> GCVSPLUtil::splder(int derivOrder, int degree, Real t, const Vector& x, const Vector_<Vec<K> >& coeff) {
00094     assert(derivOrder >= 0);
00095     assert(t >= x[0] && t <= x[x.size()-1]);
00096     assert(x.size() == coeff.size());
00097     assert(degree > 0 && degree%2==1);
00098     assert(x.hasContiguousData());
00099     
00100     // Create various temporary variables.
00101 
00102     
00103     Vec<K> result;
00104     int m = (degree+1)/2;
00105     int n = x.size();
00106     int interval = (int) ceil(n*(t-x[0])/(x[n-1]-x[0]));
00107 
00108     const int MaxCheapM = 32;
00109     Real qbuf[2*MaxCheapM];
00110 
00111     Real *q = qbuf; // tentatively
00112     if (m > MaxCheapM)
00113         q = new Real[2*m]; // use heap instead; don't forget to delete
00114     
00115     int offset = (int) (&coeff[1][0]-&coeff[0][0]);
00116 
00117     // Evaluate the spline one component at a time.
00118     
00119     for (int i = 0; i < K; ++i)
00120         result[i] = SimTK_splder_(&derivOrder, &m, &n, &t, &x[0], &coeff[0][i], &interval, q, offset);
00121     
00122     if (m > MaxCheapM)
00123         delete[] q;
00124     
00125     return result;
00126 }
00127 
00128 } // namespace SimTK
00129 
00130 #endif // SimTK_SIMMATH_GCVSPL_UTIL_H_
00131 
00132 
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